SubtiBank SubtiBank
yvrD [2018-02-09T08:30:38.000Z]
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yvrD [2018-02-09T08:30:38.000Z]

similar to ketoacyl-carrier protein reductase
locus
BSU33190
pI
4.68
mw
28.07 kDa
protein length
263 aa Sequence Blast
gene length
789 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,404,835 → 3,405,626

    The protein

    Paralogous protein(s)

  • [protein|687EB1E57D116F6D3A1F9A65505E1A069F34DC82|YvaG], [protein|20A7DBA142F3BF8DCAD9732BD908CE8CC79AA993|BacC] (32,1%), [protein|EAEEA4DD9641919830A81185333A2610B964D37C|YhdF]

    • Structure

  • [PDB|3T4X] ([protein|687EB1E57D116F6D3A1F9A65505E1A069F34DC82|YvaG] from ''B. anthracis'', 45% identity, 73% similarity)

    • Expression and Regulation

    Operons

    genes
    [gene|0FD332269D2D6103E57ACE719E39977C68E38F0A|yvrD]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B046 (yvrD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1045 NBRP B. subtilis, Japan]
  • BKE33190 (Δ[gene|0FD332269D2D6103E57ACE719E39977C68E38F0A|yvrD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAGAATCATTCCTTTTG, downstream forward: _UP4_TAGTATAAAAAAACGCATCC
  • BKK33190 (Δ[gene|0FD332269D2D6103E57ACE719E39977C68E38F0A|yvrD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAGAATCATTCCTTTTG, downstream forward: _UP4_TAGTATAAAAAAACGCATCC